Select File | Options, click the 
button, or press Ctrl+O.
Select the Colors tab.
Set the required options as described in the following:
Set the Color options to determine the colors and patterns used to identify the differences between folders.
To set the Color options:
Select File | Options, click the button, or press Ctrl+O.
Select the Colors tab.
Set the required options as described in the following:
To locate the type of difference, use the section headed Addition, Deletion, or Modification.
To set the Unselected color, use the left pair of buttons. This will determine the color that indicates that the difference is not yet included in the target.
To set the Selected color, use the left pair of buttons. This will determine the color that indicates that the line has been selected for the target file.
To set a background color, click the left button of the pair.
To set a text color, click the right button of the pair.
To set a color:
Click the button corresponding to the color you want to change.
Select the required color from the color palette.
If you want to further customize the color, click the Define Custom Colors button.
Set the color either by entering values in the Hue, Sat, Lum, Red, Green and Blue fields or dragging the arrow key in the color scroll bar. The color will be displayed in the Color|Solid box.
Click the Add to Custom Colors button to add the color to Custom colors box
When you have chosen the color, click OK. You will be returned to the Colors tab and the color of the selected button will have changed.
To set the other options on the Colors tab:
To choose the pattern for conflicts, choose a pattern from the corresponding list under Resolved or Unresolved. This pattern will appear as a background against the file.
To choose whether to use colors for differences, select or deselect the option Use colors to indicate differences.
To choose whether to use colors for selection, select or deselect the option Use colors to indicate selection.
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